SMTL ID : 8yc0.1

T cell receptor V delta2 V gamma9 in GDN

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-2-1-1-1-mer

Ligands

1 x CLR: CHOLESTEROL(Non-covalent)

CLR.1: 9 residues within 4Å: Chain B: A.48, L.51, R.52 Chain F: V.128, F.135 Chain G: F.301, T.304, F.309 Chain H: Y.311 9 PLIP interactions: 3 interactions with chain G, 3 interactions with chain B, 1 interactions with chain H, 2 interactions with chain F Hydrophobic interactions: G:F.301, G:T.304, G:F.309, B:A.48, B:L.51, B:L.51, H:Y.311, F:V.128, F:F.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xin, W. et al., Structures of human gamma delta T cell receptor-CD3 complex. Nature (2024)

Release Date

2024-05-08

Peptides

T-cell surface glycoprotein CD3 zeta chain: AB
T-cell surface glycoprotein CD3 delta chain: C
T-cell surface glycoprotein CD3 epsilon chain: DE
T-cell surface glycoprotein CD3 gamma chain: F
T cell receptor delta variable 2,T cell receptor delta constant: G
T cell receptor gamma variable 9,T cell receptor gamma constant 1: H

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
a

B
b

C
d

D
e

E
f

F
g

G
m

H
n

Membrane

We predict this structure to be a membrane protein.
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T-cell surface glycoprotein CD3 zeta chain

T-cell surface glycoprotein CD3 delta chain

T-cell surface glycoprotein CD3 epsilon chain

T-cell surface glycoprotein CD3 gamma chain

T cell receptor delta variable 2,T cell receptor delta constant

T cell receptor gamma variable 9,T cell receptor gamma constant 1

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