SMTL ID : 8yf1.1

Cryo-EM structure of human SV2A in complex with Brivaracetam

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x VLX: (2S)-2-[(4R)-2-oxidanylidene-4-propyl-pyrrolidin-1-yl]butanamide(Non-covalent)

VLX.1: 11 residues within 4Å: Chain A: L.176, I.273, F.277, C.297, W.300, Y.461, L.464, I.663, W.666, N.667, D.670 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.176, A:I.273, A:F.277, A:F.277, A:W.300, A:W.300, A:W.300, A:Y.461, A:L.464, A:I.663, A:W.666, A:W.666 Hydrogen bonds: A:N.667 VLX.2: 15 residues within 4Å: Chain B: L.176, I.273, F.277, C.297, W.300, W.454, M.457, Y.461, I.663, W.666, N.667, D.670, N.690, C.693, K.694 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.176, B:I.273, B:F.277, B:W.300, B:W.300, B:W.454, B:Y.461, B:Y.461

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qu, Q. et al., Cryo-EM structure of human SV2A in complex with Brivaracetam. To Be Published

Release Date

2024-06-12

Peptides

Synaptic vesicle glycoprotein 2A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Membrane

We predict this structure to be a membrane protein.
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Synaptic vesicle glycoprotein 2A

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