SMTL ID : 8yhl.1

The Crystal Structure of Tgf-Beta Type I Receptor (Alk5) from Biortus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

monomer

Ligands

1 x 01: 2-fluoranyl-~{N}-[[5-(6-methylpyridin-2-yl)-4-([1,2,4]triazolo[1,5-a]pyridin-6-yl)-1~{H}-imidazol-2-yl]methyl]aniline

01.1: 19 residues within 4Å: Chain A: G.15, K.16, G.17, V.22, A.33, V.34, K.35, E.48, Y.52, L.63, L.81, S.83, D.84, Y.85, H.86, K.140, N.141, L.143, D.154 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:V.22, A:A.33, A:A.33, A:K.35, A:Y.52, A:L.63, A:L.81, A:L.143 Hydrogen bonds: A:K.35, A:K.35, A:H.86, A:K.140 Water bridges: A:E.48, A:Y.85, A:N.141, A:D.154 Halogen bonds: A:K.140

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 1 residues within 4Å: Chain A: D.189 1 PLIP interactions: 1 interactions with chain A Water bridges: A:D.189 EDO.4: 2 residues within 4Å: Chain A: K.246, E.250 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.245, A:E.250

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 5 residues within 4Å: Chain A: R.135, I.170, P.172, N.173, V.176 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.176 Hydrogen bonds: A:N.173, A:N.173 Salt bridges: A:R.135 ACT.5: 3 residues within 4Å: Chain A: T.178, R.180, P.239 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:T.178 Water bridges: A:R.180 Salt bridges: A:R.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, F. et al., The Crystal Structure of Tgf-Beta Type I Receptor (Alk5) from Biortus. To Be Published

Release Date

2024-03-13

Peptides

TGF-beta receptor type-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TGF-beta receptor type-1

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