SMTL ID : 8yif.1

Crystal structure of GH13_30 alpha-glucosidase CmmB in complex with acarviosin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x 01: Acarviosin

01.1: 18 residues within 4Å: Chain A: D.74, Y.77, H.117, V.161, F.162, F.185, Q.189, R.219, D.221, V.222, H.224, E.278, W.280, H.336, D.337, I.360, R.428, R.432 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:F.185, A:V.222 Hydrogen bonds: A:D.74, A:H.117, A:Q.189, A:R.219, A:R.219, A:V.222, A:E.278, A:E.278, A:R.428, A:R.428, A:R.432 Water bridges: A:D.74, A:D.337, A:D.337, A:R.364

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saburi, W. et al., Molecular mechanism for the substrate specificity of Arthrobacter globiformis M6 alpha-glucosidase CmmB, belonging to glycoside hydrolase family 13 subfamily 30. Food Biosci (2024)

Release Date

2024-07-03

Peptides

Alpha-glucosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alpha-glucosidase