SMTL ID : 8yl7.1

EDS1-SAG101-NRG1C heterotrimer

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x 01: [[(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-[(2~{S},3~{R},4~{S},5~{R})-5-[[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]oxy-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate

01.1: 26 residues within 4Å: Chain A: N.422, R.425, D.433, D.469, N.472, Y.473, R.475, H.476, K.478, T.482, Y.485, G.489, P.491, T.492 Chain B: K.301, M.304, A.305, E.308, K.371, R.372, R.373, F.376, S.377, N.380, D.436, L.438 29 PLIP interactions: 14 interactions with chain A, 15 interactions with chain B Hydrogen bonds: A:N.422, A:D.469, A:N.472, A:R.475, A:H.476, A:K.478, A:G.489, A:T.492, A:T.492, B:K.301, B:E.308, B:K.311, B:R.372, B:R.373, B:N.380, B:D.436 Salt bridges: A:R.425, A:K.478, A:K.478, B:K.301, B:K.301, B:K.371, B:R.372, B:R.372, B:R.372, B:R.373, B:R.373 pi-Stacking: A:H.476, A:H.476

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiao, Y. et al., Activation and inhibition mechanisms of a plant helper NLR. Nature (2025)

Release Date

2025-01-29

Peptides

Protein EDS1: A
Senescence-associated carboxylesterase 101: B
Probable disease resistance protein At5g66890: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Protein EDS1

Senescence-associated carboxylesterase 101

Probable disease resistance protein At5g66890

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