SMTL ID : 8ylj.1

Crystal structure of Pectobacterium atrosepticum PecS in complex with uric acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

2 x URC: URIC ACID(Non-covalent)

URC.1: 10 residues within 4Å: Chain A: F.58, D.59, A.62, R.66, M.83, H.133 Chain B: I.11, W.15, M.27, R.34 10 PLIP interactions: 7 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:D.59, A:D.59, A:D.59, A:R.66, B:W.15, B:R.34, B:R.34 Water bridges: A:E.137 pi-Stacking: A:F.58, A:F.58 URC.2: 10 residues within 4Å: Chain A: I.11, W.15, M.27, R.34 Chain B: F.58, D.59, A.62, R.66, M.83, H.133 10 PLIP interactions: 7 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:D.59, B:D.59, B:D.59, B:R.66, A:W.15, A:R.34, A:R.34 Water bridges: B:E.137 pi-Stacking: B:F.58, B:F.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Song, W.S. et al., Structural basis of transcriptional regulation by UrtR in response to uric acid. Nucleic Acids Res. (2024)

Release Date

2024-11-13

Peptides

Regulatory protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Regulatory protein

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