SMTL ID : 8ymc.1

FtsEX in nanodisc

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-mer

Ligands

2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 19 residues within 4Å: Chain A: Y.13, R.17, S.39, G.40, A.41, G.42, K.43, S.44, T.45, Q.88, Q.165, H.197 Chain B: K.132, I.138, Q.139, S.141, G.142, G.143, E.144 20 PLIP interactions: 13 interactions with chain A, 7 interactions with chain B Hydrogen bonds: A:G.40, A:G.42, A:K.43, A:S.44, A:S.44, A:T.45, A:Q.88, A:Q.165, B:K.132, B:S.141, B:S.141, B:G.142, B:G.143, B:E.144, B:E.144 Salt bridges: A:K.43, A:K.43, A:H.197 pi-Stacking: A:Y.13, A:Y.13 ATP.2: 18 residues within 4Å: Chain A: I.138, Q.139, S.141, G.142, G.143, E.144 Chain B: Y.13, R.17, S.39, G.40, A.41, G.42, K.43, S.44, T.45, Q.88, Q.165, H.197 19 PLIP interactions: 15 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:R.17, B:G.40, B:A.41, B:G.42, B:K.43, B:S.44, B:S.44, B:T.45, B:Q.88, B:Q.165, A:S.141, A:G.142, A:G.143, A:E.144 Salt bridges: B:K.43, B:K.43, B:H.197 pi-Stacking: B:Y.13, B:Y.13

2 x LPP: 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE(Non-covalent)

LPP.3: 14 residues within 4Å: Chain C: V.88, V.92, Y.99, P.101, L.292, V.296, V.299, F.303, T.305, F.307 Chain D: W.204, R.207, L.214, V.215 15 PLIP interactions: 10 interactions with chain C, 5 interactions with chain D Hydrophobic interactions: C:V.88, C:V.92, C:Y.99, C:L.292, C:V.296, C:V.299, C:F.303, C:F.303, C:F.307, D:L.214, D:V.215 Hydrogen bonds: C:T.305 Salt bridges: D:R.207, D:R.207, D:R.207 LPP.4: 15 residues within 4Å: Chain C: W.204, R.207, L.211, L.214 Chain D: V.88, N.91, V.92, Y.99, P.101, L.292, V.299, F.303, T.305, F.307, I.309 17 PLIP interactions: 12 interactions with chain D, 5 interactions with chain C Hydrophobic interactions: D:V.88, D:N.91, D:V.92, D:Y.99, D:L.292, D:V.299, D:F.303, D:F.303, D:F.307, D:F.307, D:I.309, C:L.211, C:L.214 Hydrogen bonds: D:T.305 Salt bridges: C:R.207, C:R.207, C:R.207

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, S. et al., Structural and molecular dynamics simulations reveal the mechanotransduction mechanism of FtsEX. To Be Published

Release Date

2025-03-12

Peptides

Cell division ATP-binding protein FtsE: AB
Cell division protein FtsX: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Cell division ATP-binding protein FtsE

Cell division protein FtsX