SMTL ID : 8yn1.1

Cryo-EM structure of NRG1A(LRR) in complex with EDS1-SAG101-(ADPr-ATP)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x APR: ADENOSINE-5-DIPHOSPHORIBOSE(Non-covalent)

APR.1: 20 residues within 4Å: Chain A: N.421, R.424, D.468, N.471, Y.472, H.475, K.477, Y.484, G.488, P.490 Chain B: K.299, M.302, A.303, E.306, S.375, N.378, M.382, D.434, L.436 Ligands: ATP.2 14 PLIP interactions: 10 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:N.421, A:D.468, A:N.471, A:Y.472, A:H.475, A:G.488, B:E.306, B:D.434 Salt bridges: A:R.424, A:K.477, A:K.477, B:K.299, B:K.299 pi-Stacking: A:H.475

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.2: 13 residues within 4Å: Chain A: Y.472, K.477, T.481, R.487, G.488, P.490, T.491 Chain B: K.369, R.370, R.371, F.374, N.378 Ligands: APR.1 11 PLIP interactions: 2 interactions with chain A, 9 interactions with chain B Hydrogen bonds: A:T.481, A:T.491, B:R.371, B:N.378 Salt bridges: B:K.369, B:R.370, B:R.370, B:R.370, B:R.371, B:R.371 pi-Stacking: B:F.374

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, S. et al., Balanced plant helper NLR activation by a modified host protein complex. Nature (2025)

Release Date

2024-12-11

Peptides

Protein EDS1: A
Senescence-associated carboxylesterase 101: B
Probable disease resistance protein At5g66900: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Protein EDS1

Senescence-associated carboxylesterase 101

Probable disease resistance protein At5g66900