SMTL ID : 8yns.1

Cryo-EM structure of SNAP-94847-bound MCHR1, S1 state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x 01: ~{N}-[3-[1-[[4-[3,4-bis(fluoranyl)phenoxy]phenyl]methyl]piperidin-4-yl]-4-methyl-phenyl]-2-methyl-propanamide

01.1: 20 residues within 4Å: Chain D: F.162, D.204, F.207, M.211, M.214, I.215, D.238, S.241, Q.242, S.245, F.473, W.477, Y.480, Y.481, Y.501, I.505, G.508, Y.509, N.511, S.512 14 PLIP interactions: 14 interactions with chain D Hydrophobic interactions: D:F.162, D:F.207, D:M.214, D:Q.242, D:F.473, D:F.473, D:W.477, D:W.477, D:W.477, D:Y.480, D:I.505, D:Y.509 Salt bridges: D:D.238 pi-Stacking: D:W.477

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, X. et al., Structural insights into physiological activation and antagonism of melanin-concentrating hormone receptor MCHR1. Cell Discov (2024)

Release Date

2024-12-18

Peptides

Antibody 1B3 Fab heavy chain: A
Antibody 1B3 Fab light chain: B
Glue molecule 4-9: C
Melanin-concentrating hormone receptor 1,Soluble cytochrome b562: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
N

D
R

Membrane

We predict this structure to be a membrane protein.
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Antibody 1B3 Fab heavy chain

Antibody 1B3 Fab light chain

Glue molecule 4-9

Melanin-concentrating hormone receptor 1,Soluble cytochrome b562

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