SMTL ID : 8yr0.1

Cryo-EM Structure of AdeG from Acinetobacter baumannii

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-trimer

Ligands

6 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)

LMT.1: 11 residues within 4Å: Chain A: Y.327, I.578, I.620, F.623, F.633, T.635, F.671, P.672, P.674, M.677 Ligands: LMT.2 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.327, A:Y.327, A:F.623, A:T.635 LMT.2: 7 residues within 4Å: Chain A: F.179, F.615, F.623, L.679, G.680, T.681 Ligands: LMT.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.179, A:F.615, A:F.623 Hydrogen bonds: A:L.679, A:T.681 LMT.3: 7 residues within 4Å: Chain B: I.578, I.620, F.633, F.671, P.672, P.674 Ligands: LMT.4 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:I.578, B:F.633, B:P.674 LMT.4: 6 residues within 4Å: Chain B: F.615, F.623, L.679, G.680, T.681 Ligands: LMT.3 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:F.615 Hydrogen bonds: B:L.679, B:T.681 LMT.5: 10 residues within 4Å: Chain C: Y.327, Y.576, I.578, I.620, F.633, F.671, P.672, P.674, M.677 Ligands: LMT.6 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:Y.327, C:I.578, C:F.633 LMT.6: 6 residues within 4Å: Chain C: P.290, F.292, F.615, F.623, L.679 Ligands: LMT.5 5 PLIP interactions: 5 interactions with chain C Hydrophobic interactions: C:P.290, C:F.292, C:F.615, C:F.623 Hydrogen bonds: C:L.679

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ouyang, Z. et al., Cryo-EM Structure of AdeG from Acinetobacter baumannii. To Be Published

Release Date

2025-01-01

Peptides

Cation/multidrug efflux pump: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
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Cation/multidrug efflux pump