SMTL ID : 8yr5.1

Crystal structure of E. coli phosphatidylserine synthase in apo state

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.83 Å

Oligo State

homo-12-mer

Ligands

24 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.299, R.344, Y.348 Chain C: R.339, Y.428, R.429 Ligand excluded by PLIP SO4.2: 5 residues within 4Å: Chain A: H.148, Y.283, H.367, K.369, N.384 Ligand excluded by PLIP SO4.3: 7 residues within 4Å: Chain B: I.295, R.299, R.344, Y.348 Chain E: R.339, Y.428, R.429 Ligand excluded by PLIP SO4.4: 7 residues within 4Å: Chain B: L.66, H.148, Y.169, Y.283, H.367, K.369, N.384 Ligand excluded by PLIP SO4.5: 6 residues within 4Å: Chain A: R.339, Y.428, R.429 Chain C: R.299, R.344, Y.348 Ligand excluded by PLIP SO4.6: 7 residues within 4Å: Chain C: L.66, H.148, Y.169, Y.283, H.367, K.369, N.384 Ligand excluded by PLIP SO4.7: 6 residues within 4Å: Chain D: R.299, R.344, Y.348 Chain H: R.339, Y.428, R.429 Ligand excluded by PLIP SO4.8: 7 residues within 4Å: Chain D: L.66, H.148, Y.169, R.177, Y.283, H.367, N.384 Ligand excluded by PLIP SO4.9: 6 residues within 4Å: Chain B: R.339, Y.428, R.429 Chain E: R.299, R.344, Y.348 Ligand excluded by PLIP SO4.10: 7 residues within 4Å: Chain E: L.66, H.148, Y.169, R.177, Y.283, H.367, N.384 Ligand excluded by PLIP SO4.11: 6 residues within 4Å: Chain F: R.299, R.344, Y.348 Chain I: R.339, Y.428, R.429 Ligand excluded by PLIP SO4.12: 6 residues within 4Å: Chain F: L.66, H.148, Y.169, R.177, Y.283, H.367 Ligand excluded by PLIP SO4.13: 5 residues within 4Å: Chain G: R.339, Y.428 Chain J: R.299, R.344, Y.348 Ligand excluded by PLIP SO4.14: 6 residues within 4Å: Chain G: R.299, R.344, Y.348 Chain J: R.339, Y.428, R.429 Ligand excluded by PLIP SO4.15: 8 residues within 4Å: Chain G: L.66, H.148, Y.169, R.177, Y.283, H.367, K.369, N.384 Ligand excluded by PLIP SO4.16: 6 residues within 4Å: Chain D: R.339, Y.428, R.429 Chain H: R.299, R.344, Y.348 Ligand excluded by PLIP SO4.17: 7 residues within 4Å: Chain H: L.66, H.148, Y.169, R.177, Y.283, H.367, N.384 Ligand excluded by PLIP SO4.18: 6 residues within 4Å: Chain F: R.339, Y.428, R.429 Chain I: R.299, R.344, Y.348 Ligand excluded by PLIP SO4.19: 5 residues within 4Å: Chain I: L.66, H.148, Y.283, H.367, N.384 Ligand excluded by PLIP SO4.20: 7 residues within 4Å: Chain J: L.66, H.148, Y.169, R.177, Y.283, H.367, N.384 Ligand excluded by PLIP SO4.21: 6 residues within 4Å: Chain K: R.299, R.344, Y.348 Chain L: R.339, Y.428, R.429 Ligand excluded by PLIP SO4.22: 6 residues within 4Å: Chain K: L.66, H.148, Y.283, H.367, K.369, N.384 Ligand excluded by PLIP SO4.23: 6 residues within 4Å: Chain K: R.339, Y.428, R.429 Chain L: R.299, R.344, Y.348 Ligand excluded by PLIP SO4.24: 6 residues within 4Å: Chain L: L.66, H.148, Y.283, H.367, K.369, N.384 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, J. et al., Crystal structure of E. coli phosphatidylserine synthase in apo state. To Be Published

Release Date

2024-11-20

Peptides

CDP-diacylglycerol--serine O-phosphatidyltransferase: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

CDP-diacylglycerol--serine O-phosphatidyltransferase