SMTL ID : 8yt6.1

Human PPAR alpha ligand binding domain in complex with a 1H-pyrazolo[3,4-b]pyridine-derived compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 01: 6-(2-ethoxyethyl)-1-(4-fluorophenyl)-3-pentan-3-yl-pyrazolo[3,4-b]pyridine-4-carboxylic acid

01.1: 19 residues within 4Å: Chain A: I.76, F.77, C.80, Q.81, T.83, S.84, Y.118, L.125, M.134, L.148, L.151, F.155, I.158, M.159, H.244, V.248, L.260, L.264, Y.268 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.76, A:Q.81, A:L.125, A:L.125, A:I.158, A:V.248, A:L.260, A:L.264 Hydrogen bonds: A:S.84, A:S.84, A:Y.118, A:Y.268 Salt bridges: A:H.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tachibana, K. et al., Structural evolution of 1H-pyrazolo[3,4-b]pyridine-derived PPARalpha activators as leads for nonalcoholic steatohepatitis. To Be Published

Release Date

2025-04-02

Peptides

Peroxisome proliferator-activated receptor alpha: A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor alpha

Peroxisome proliferator-activated receptor gamma coactivator 1-alpha

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