SMTL ID : 8yta.1

The crystal structure of PDE8A with 1604R

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.90, H.126, D.127, D.256 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.90, A:H.126, A:D.127, A:D.256, H2O.1, H2O.1

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: D.127, E.156 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.127, H2O.1, H2O.1, H2O.1, H2O.2, H2O.2

1 x 01: 7-[(3-azanyl-5-chloranyl-phenyl)methyl]-8-[3-(4-chlorophenyl)propylsulfanyl]-3-methyl-purine-2,6-dione

01.3: 16 residues within 4Å: Chain A: Y.85, T.198, M.200, H.203, K.253, V.257, N.259, P.260, I.274, Y.278, M.294, F.297, S.307, Q.308, F.311, F.315 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:M.200, A:F.311, A:F.315, A:F.315 Hydrogen bonds: A:S.307, A:Q.308, A:Q.308 pi-Stacking: A:F.297, A:F.311, A:F.311

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, Y.-Y. et al., Targeting phosphodiesterase 8A (PDE8A) to boost adipogenesis and hair cycling. To Be Published

Release Date

2025-10-22

Peptides

High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A