SMTL ID : 8ywv.1

Human PPAR alpha ligand binding domain in complex with a 1H-pyrazolo[3,4-b]pyridine-derived compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 01: 1-(4-fluorophenyl)-6-[4-(2-methylpropoxycarbonyl)piperazin-1-yl]-3-pentan-3-yl-pyrazolo[3,4-b]pyridine-4-carboxylic acid

01.1: 23 residues within 4Å: Chain A: I.76, F.77, C.80, Q.81, T.83, S.84, T.87, Y.118, I.121, M.124, L.125, V.128, M.134, L.148, L.151, F.155, I.158, M.159, H.244, V.248, L.260, L.264, Y.268 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:T.87, A:V.128, A:F.155, A:I.158, A:V.248, A:L.260 Hydrogen bonds: A:S.84, A:S.84, A:Y.118, A:Y.268 Salt bridges: A:H.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tachibana, K. et al., Structural evolution of 1H-pyrazolo[3,4-b]pyridine-derived PPARalpha activators as leads for nonalcoholic steatohepatitis. To Be Published

Release Date

2025-04-09

Peptides

Peroxisome proliferator-activated receptor alpha: A
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor alpha

Peroxisome proliferator-activated receptor gamma coactivator 1-alpha

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