SMTL ID : 8z0k.1

Cryo-EM structure of Cas8-HNH system at full R-loop state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-6-1-1-1-mer

Ligands

1 x DG- DT- DG- DC- DG- DG- DA: DNA (5'-D(P*GP*TP*GP*CP*GP*GP*A)-3')(Non-covalent)

DG-DT-DG-DC-DG-DG-DA.1: 14 residues within 4Å: Chain F: A.84, K.85, R.88, G.91, S.192, N.193, S.196, S.204, K.205 Chain I: C.33, G.34, C.35, A.36, C.37 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, X. et al., Structural basis for the type I-F Cas8-HNH system. Embo J. (2024)

Release Date

2024-10-02

Peptides

type I-F CRISPR-associated protein Csy3: ABCDGH
hypothetical protein J6N51_11000: E
HNH endonuclease: F
type I-F CRISPR-associated endoribonuclease Cas6/Csy4: K

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

G
G

H
H

E
E

F
F

K
M

type I-F CRISPR-associated protein Csy3

hypothetical protein J6N51_11000

HNH endonuclease

type I-F CRISPR-associated endoribonuclease Cas6/Csy4

Related Entries With Identical Sequence