SMTL ID : 8z21.1

Cryo-EM structure of Escherichia coli OppBCDF in the resting state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

2 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 9 residues within 4Å: Chain C: H.262, P.263, C.299, Q.302, C.305, H.307, C.312, C.329, F.330 4 PLIP interactions: 4 interactions with chain C, Metal complexes: C:C.299, C:C.305, C:C.312, C:C.329 SF4.2: 8 residues within 4Å: Chain D: H.258, C.298, R.301, C.304, I.306, C.311, C.328, L.329 4 PLIP interactions: 4 interactions with chain D, Metal complexes: D:C.298, D:C.304, D:C.311, D:C.328

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, P. et al., Cryo-EM structure of Escherichia coli OppBCDF in the resting state. To Be Published

Release Date

2025-04-16

Peptides

Oligopeptide transport system permease protein OppB: A
Oligopeptide transport system permease protein OppC: B
Oligopeptide transport ATP-binding protein OppD: C
Oligopeptide transport ATP-binding protein OppF: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Oligopeptide transport system permease protein OppB

Oligopeptide transport system permease protein OppC

Oligopeptide transport ATP-binding protein OppD

Oligopeptide transport ATP-binding protein OppF