SMTL ID : 8z36.1

Crystal structure of HOIP PUB domain in complex with sertraline complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.63 Å

Oligo State

homo-trimer

Ligands

3 x SRE: (1S,4S)-4-(3,4-dichlorophenyl)-N-methyl-1,2,3,4-tetrahydronaphthalen-1-amine(Non-covalent)

SRE.1: 10 residues within 4Å: Chain A: L.41, R.44, A.51, E.156, L.157, L.160, R.167, L.171, L.174, L.175 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.41, A:L.41, A:L.171, A:L.174 SRE.2: 12 residues within 4Å: Chain B: L.41, A.51, R.55, L.153, E.156, L.157, L.160, R.167, L.171, L.174, L.175 Chain C: N.98 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain C Hydrophobic interactions: B:L.41, B:L.41, B:L.174, B:L.174, C:N.98 SRE.3: 10 residues within 4Å: Chain C: L.41, R.44, A.51, E.156, L.157, L.160, R.167, L.171, L.174, L.175 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:L.41, C:A.51, C:L.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhong, F. et al., Repurposing Tolfenamic Acid to Anchor the Uncharacterized Pocket of the PUB Domain for Proteolysis of the Atypical E3 Ligase HOIP. Acs Chem.Biol. (2024)

Release Date

2024-11-27

Peptides

E3 ubiquitin-protein ligase RNF31: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

E3 ubiquitin-protein ligase RNF31

Related Entries With Identical Sequence