SMTL ID : 8za7.1

ART-ARH type toxin effector-immunity protein pair of Listeria monocytogenes

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

hetero-1-1-mer

Ligands

1 x AR6: [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL[HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE(Non-covalent)

AR6.1: 28 residues within 4Å: Chain A: E.44, F.45, Y.65, D.74, D.75, D.116, I.117, G.118, S.119, V.120, T.121, N.142, F.143, D.144, N.145, G.146, N.147, G.148, M.151, H.181, R.185, G.253, Y.254, D.285, D.287, T.288 Ligands: MG.2, MG.3 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:D.116, A:S.119, A:S.119, A:V.120, A:T.121, A:T.121, A:N.145, A:G.148, A:R.185, A:D.285, A:T.288 Water bridges: A:Y.65, A:D.116, A:G.118, A:N.147, A:N.147 Salt bridges: A:H.181 pi-Stacking: A:Y.254

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 7 residues within 4Å: Chain A: S.73, D.74, D.75, D.287, T.288 Ligands: AR6.1, MG.3 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.73, A:D.74, A:D.75, A:D.287, H2O.3 MG.3: 6 residues within 4Å: Chain A: E.44, D.285, D.287, T.288 Ligands: AR6.1, MG.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.44, A:D.285, A:D.287, A:T.288

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ouyang, S. et al., ART-ARH type toxin effector-immunity protein pair of Listeria monocytogenes. To Be Published

Release Date

2025-04-30

Peptides

Lmo0067 protein: A
Lmo0066 protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lmo0067 protein

Lmo0066 protein