SMTL ID : 8zbn.1

Mouse MYH6 R404Q left ventricle ATM complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-6-4-6-mer

Ligands

6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Covalent)

ADP.1: 15 residues within 4Å: Chain A: G.9, S.10, G.11, L.12, K.14, G.152, D.153, G.178, K.209, E.210, G.297, G.298, T.299, M.301, Y.302 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:S.10, A:G.11, A:L.12, A:L.12, A:D.153, A:D.153, A:G.298 Salt bridges: A:K.14, A:K.14 pi-Stacking: A:Y.302 ADP.2: 15 residues within 4Å: Chain B: G.9, S.10, G.11, L.12, K.14, G.152, D.153, G.178, K.209, E.210, G.297, G.298, T.299, M.301, Y.302 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:S.10, B:G.11, B:L.12, B:L.12, B:D.153, B:D.153, B:G.298 Salt bridges: B:K.14, B:K.14 pi-Stacking: B:Y.302 ADP.3: 16 residues within 4Å: Chain C: G.9, S.10, G.11, L.12, K.14, G.152, D.153, G.178, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302 10 PLIP interactions: 10 interactions with chain C Hydrogen bonds: C:S.10, C:G.11, C:L.12, C:L.12, C:D.153, C:D.153, C:G.298 Salt bridges: C:K.14, C:K.14 pi-Stacking: C:Y.302 ADP.4: 15 residues within 4Å: Chain D: G.9, S.10, G.11, L.12, K.14, G.152, D.153, G.178, K.209, E.210, G.297, G.298, T.299, M.301, Y.302 11 PLIP interactions: 11 interactions with chain D Hydrogen bonds: D:S.10, D:G.11, D:L.12, D:L.12, D:D.153, D:D.153, D:G.298, D:T.299 Salt bridges: D:K.14, D:K.14 pi-Stacking: D:Y.302 ADP.5: 14 residues within 4Å: Chain E: G.9, S.10, G.11, L.12, K.14, G.152, D.153, K.209, E.210, G.297, G.298, T.299, M.301, Y.302 10 PLIP interactions: 10 interactions with chain E Hydrogen bonds: E:S.10, E:G.11, E:L.12, E:L.12, E:D.153, E:D.153, E:G.298 Salt bridges: E:K.14, E:K.14 pi-Stacking: E:Y.302 ADP.6: 16 residues within 4Å: Chain F: G.9, S.10, G.11, L.12, K.14, G.152, D.153, G.178, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302 11 PLIP interactions: 11 interactions with chain F Hydrogen bonds: F:S.10, F:G.11, F:L.12, F:L.12, F:D.153, F:D.153, F:G.298, F:T.299 Salt bridges: F:K.14, F:K.14 pi-Stacking: F:Y.302

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, D.N. et al., Cryo-EM structure of mouse MYH6 R404Q left ventricle ATM complex. To Be published

Release Date

2025-01-29

Peptides

Actin, alpha cardiac muscle 1: ABCDEF
Tropomyosin alpha-1 chain: GHIJ
Myosin-6: KLMNOP

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
I

C
J

D
D

E
K

F
M

G
R

H
T

I
S

J
U

K
A

L
C

M
F

N
G

O
H

P
L

Actin, alpha cardiac muscle 1

Tropomyosin alpha-1 chain

Myosin-6

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