SMTL ID : 8zhp.1

Dimer of SARS-CoV-2 S1 in complex with H18 and R1-32 Fabs

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-2-2-2-mer
Ligands
2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Yan, Q. et al., Antibodies utilizing VL6-57 light chains target a convergent cryptic epitope on SARS-CoV-2 spike protein and potentially drive the genesis of Omicron variants. Nat Commun (2024)
Release Date
2024-08-21
Peptides
Spike glycoprotein: AF
Heavy chain of R1-32 Fab: BG
Light chain of R1-32 Fab: CH
Light chain of H18 Fab: DI
Heavy chain of H18 Fab: EJ
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
F
A
B
D
G
B
C
E
H
F
D
L
I
I
E
H
J
G

Spike glycoprotein

Toggle Identical (AF)

Heavy chain of R1-32 Fab

Toggle Identical (BG)

Light chain of R1-32 Fab

Toggle Identical (CH)

Light chain of H18 Fab

Toggle Identical (DI)

Heavy chain of H18 Fab

Toggle Identical (EJ)

Related Entries With Identical Sequence

7ydi.1 | 7ydy.1 | 7ye5.1 | 7ye9.1 | 7yeg.1 | 8hc4.1 | 8hc5.1 | 8zhh.1 | 8zhi.1 | 8zhj.1 | 8zhk.1 | 8zhl.1 | 8zhm.1 | 8zhn.1 | 8zho.1