SMTL ID : 8zj1.1

Human left ventricle F-actin

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-pentamer

Ligands

5 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 16 residues within 4Å: Chain A: G.9, S.10, G.11, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:S.10, A:L.12, A:D.153, A:D.153, A:K.209, A:E.210, A:G.298 Salt bridges: A:K.14, A:K.14, A:K.332 pi-Stacking: A:Y.302 ADP.2: 16 residues within 4Å: Chain B: N.8, G.9, S.10, G.11, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.298, T.299, M.301, Y.302, K.332 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:S.10, B:L.12, B:D.153, B:D.153, B:K.209, B:G.298, B:M.301, B:K.332 Salt bridges: B:K.14, B:K.14 pi-Stacking: B:Y.302 ADP.3: 16 residues within 4Å: Chain C: G.9, S.10, G.11, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 10 PLIP interactions: 10 interactions with chain C Hydrogen bonds: C:S.10, C:D.153, C:D.153, C:K.209, C:G.298, C:M.301, C:K.332 Salt bridges: C:K.14, C:K.14 pi-Stacking: C:Y.302 ADP.4: 16 residues within 4Å: Chain D: G.9, S.10, G.11, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 11 PLIP interactions: 11 interactions with chain D Hydrogen bonds: D:S.10, D:L.12, D:D.153, D:D.153, D:K.209, D:G.298, D:M.301, D:K.332 Salt bridges: D:K.14, D:K.14 pi-Stacking: D:Y.302 ADP.5: 16 residues within 4Å: Chain E: G.9, S.10, G.11, L.12, K.14, G.152, D.153, R.206, K.209, E.210, G.297, G.298, T.299, M.301, Y.302, K.332 10 PLIP interactions: 10 interactions with chain E Hydrogen bonds: E:S.10, E:D.153, E:D.153, E:K.209, E:G.298, E:M.301, E:K.332 Salt bridges: E:K.14, E:K.14 pi-Stacking: E:Y.302

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, D.N. et al., Human left ventricle F-actin. To Be Published

Release Date

2025-01-29

Peptides

Actin, alpha cardiac muscle 1: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
E

D
F

E
A

Actin, alpha cardiac muscle 1

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