SMTL ID : 8zkd.1

The Crystal Structure of the RON from Biortus.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 21 residues within 4Å: Chain A: I.29, G.30, K.31, G.32, H.33, F.34, G.35, V.37, A.53, K.55, L.102, P.103, Y.104, M.105, D.109, D.149, R.153, N.154, M.156, D.167 Ligands: MG.4 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:H.33, A:H.33, A:F.34, A:P.103, A:M.105, A:D.109, A:D.149, A:R.153, A:R.153, A:N.154 Water bridges: A:H.33, A:G.35, A:K.55 Salt bridges: A:K.55

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: D.173, R.204 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.173, A:R.204 EDO.3: 4 residues within 4Å: Chain A: Q.201, T.238, H.239, A.242 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.239

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 3 residues within 4Å: Chain A: N.154, D.167 Ligands: ANP.1 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.167, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, F. et al., The Crystal Structure of the RON from Biortus. To Be Published

Release Date

2024-06-26

Peptides

Macrophage-stimulating protein receptor beta chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Macrophage-stimulating protein receptor beta chain

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