SMTL ID : 8zke.1

Cryo-EM structure of inward-facing Anhydromuropeptide permease (AmpG) in complex with GlcNAc-1,6-anhMurNAc

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x 2YP: (2R)-2-[[(1R,2S,3R,4R,5R)-4-acetamido-2-[(2S,3R,4R,5S,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-6,8-dioxabicyclo[3.2.1]octan-3-yl]oxy]propanoic acid(Non-covalent)

2YP.1: 17 residues within 4Å: Chain A: L.28, Y.59, K.62, D.125, D.129, V.149, Y.152, R.153, M.156, T.334, F.337, V.338, F.354, S.358, S.361, A.362, R.365 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.28, A:F.337 Hydrogen bonds: A:D.125, A:Y.152, A:R.365, A:R.365 Salt bridges: A:R.153, A:R.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, N. et al., Cryo-EM structure of inward-facing Anhydromuropeptide permease (AmpG) in complex with GlcNAc-1,6-anhMurNAc. To Be Published

Release Date

2025-05-21

Peptides

Protein AmpG: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Protein AmpG

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