SMTL ID : 8zml.1 (1 other biounit)

Structure of TNIK with inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

monomer

Ligands

1 x 01: 2-[5-(4-fluorophenyl)-3-propan-2-yl-imidazol-4-yl]-~{N}-[4-(4-methylpiperazin-1-yl)phenyl]-1~{H}-imidazole-4-carboxamide

01.1: 23 residues within 4Å: Chain A: V.22, N.24, G.25, V.30, A.43, K.45, E.60, L.64, Y.76, L.94, V.95, M.96, E.97, F.98, C.99, G.100, A.101, G.102, Q.148, N.149, L.151, V.161, D.162 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.22, A:V.30, A:V.30, A:K.45, A:L.64, A:M.96, A:F.98, A:F.98, A:V.161 Hydrogen bonds: A:K.45, A:C.99 Halogen bonds: A:V.95

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: F.179, I.180, G.181, P.183 No protein-ligand interaction detected (PLIP) EDO.3: 2 residues within 4Å: Chain A: M.88, D.89 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.89, A:D.89

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 5 residues within 4Å: Chain A: S.68, H.69, H.70, I.73, T.75 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.68, A:H.70, A:I.73, A:T.75, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fan, Y., Structure of TNIK with inhibitor. To Be Published

Release Date

2025-05-28

Peptides

TRAF2 and NCK-interacting protein kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRAF2 and NCK-interacting protein kinase

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