SMTL ID : 8zmq.5 (19 other biounits)

Crystal Structure of the second bromodomain of human BRD4 BD2 in complex with the inhibitor Y13190

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x 01: 2-(2-(adamantan-1-yl)-4-ethyl-1H-imidazol-5-yl)-7-(2-(4-fluoro-2,6-dimethylphenoxy)-5-(2-hydroxypropan-2-yl)phenyl)-5-methylfuro[3,2-c]pyridin-4(5H)-one

01.1: 15 residues within 4Å: Chain A: W.61, P.62, F.63, V.67, D.68, L.72, L.74, C.116, Y.119, N.120, P.121, H.124, E.125, V.126, M.129 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:W.61, A:W.61, A:P.62, A:D.68, A:L.72, A:Y.119, A:P.121, A:E.125, A:V.126 Hydrogen bonds: A:D.68, A:N.120 pi-Stacking: A:H.124, A:H.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, J. et al., Discovery of the First BRD4 Second Bromodomain (BD2)-Selective Inhibitors. J.Med.Chem. (2024)

Release Date

2024-12-11

Peptides

BRD4_HUMAN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

BRD4_HUMAN

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