SMTL ID : 8zq8.1

SARS-Cov-2 3CL protease in complex with macrocyclic inhibitor CG-1039

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

homo-dimer

Ligands

2 x 01: CG-1039

01.1: 21 residues within 4Å: Chain A: H.51, M.59, Y.64, F.150, L.151, N.152, G.153, S.154, C.155, H.173, H.174, M.175, E.176, P.178, H.182, D.197, R.198, Q.199, T.200, A.201, Q.202 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:H.51, A:P.178 Hydrogen bonds: A:G.153, A:C.155, A:H.174, A:E.176, A:E.176, A:E.176, A:T.200 01.2: 21 residues within 4Å: Chain B: H.51, M.59, Y.64, F.150, L.151, N.152, G.153, S.154, C.155, H.173, H.174, M.175, E.176, P.178, H.182, D.197, R.198, Q.199, T.200, A.201, Q.202 11 PLIP interactions: 10 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:H.51, B:P.178 Hydrogen bonds: B:G.153, B:C.155, B:H.174, B:E.176, B:E.176, B:E.176, B:E.176, B:T.200, A:S.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, X. et al., SARS-Cov-2 3CL protease in complex with macrocyclic inhibitor CG-1039. To Be Published

Release Date

2025-06-11

Peptides

3C-like proteinase nsp5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

3C-like proteinase nsp5