SMTL ID : 8zrn.1

Structure of abt

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-3-mer

Ligands

8 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 3 residues within 4Å: Chain A: N.171, S.212, Y.214 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.212, A:S.212 NAG-NAG-BMA.2: 1 residues within 4Å: Chain B: N.138 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.3: 4 residues within 4Å: Chain B: N.166, T.168, R.209, D.225 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.209 NAG-NAG-BMA.4: 4 residues within 4Å: Chain C: N.171, Y.214, H.216, S.233 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.5: 4 residues within 4Å: Chain C: E.224 Chain D: T.86, R.136, N.138 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:E.224 NAG-NAG-BMA.6: 4 residues within 4Å: Chain D: N.166, R.209, D.225, I.227 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:R.209 NAG-NAG-BMA.7: 3 residues within 4Å: Chain E: R.136, N.138, S.140 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.8: 4 residues within 4Å: Chain E: N.166, R.209, D.225, I.227 No protein-ligand interaction detected (PLIP)

2 x 01: 5-[[(2~{S})-azetidin-2-yl]methoxy]-2-chloranyl-pyridine

01.9: 11 residues within 4Å: Chain A: Y.123, W.179, Y.220, C.223, Y.227 Chain B: W.80, N.132, L.133, I.134, L.142, L.144 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:W.80, B:I.134 Hydrogen bonds: A:W.179 01.10: 10 residues within 4Å: Chain C: Y.123, W.179, Y.220, C.223, Y.227 Chain D: W.80, N.132, L.133, I.134, L.142 7 PLIP interactions: 3 interactions with chain C, 4 interactions with chain D Hydrophobic interactions: C:W.179, D:W.80, D:I.134, D:L.142 Hydrogen bonds: C:W.179, C:Y.227 Halogen bonds: D:N.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Su, J. et al., Molecular insights into the alpha 6 beta 4 nicotinic acetylcholine receptor function and ligand recognition. Nat Commun (2025)

Release Date

2025-04-30

Peptides

Neuronal acetylcholine receptor subunit alpha-6: AC
Neuronal acetylcholine receptor subunit beta-4,Soluble cytochrome b562: BDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

E
E

Membrane

We predict this structure to be a membrane protein.
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Neuronal acetylcholine receptor subunit alpha-6

Neuronal acetylcholine receptor subunit beta-4,Soluble cytochrome b562

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