SMTL ID : 8zuf.1

Cryo-EM structure of P.nat ACE2 mutant in complex with MOW15-22 RBD

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 7 residues within 4Å: Chain B: T.114, N.115, H.165, I.166, G.168, N.169, T.196 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.6: 3 residues within 4Å: Chain A: D.398, S.523, N.524 No protein-ligand interaction detected (PLIP)

4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 2 residues within 4Å: Chain A: Q.60, N.82 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 4 residues within 4Å: Chain A: N.194, Y.195, S.196, H.199 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 4 residues within 4Å: Chain A: E.131, K.132, N.255, N.258 No protein-ligand interaction detected (PLIP) NAG-NAG.5: 2 residues within 4Å: Chain A: I.510, N.512 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.7: 1 residues within 4Å: Chain A: N.69 No protein-ligand interaction detected (PLIP) NAG.8: 3 residues within 4Å: Chain A: L.294, L.298, N.300 No protein-ligand interaction detected (PLIP) NAG.9: 1 residues within 4Å: Chain A: N.307 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.307 NAG.11: 4 residues within 4Å: Chain B: N.169, T.171, Y.172, S.173 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:Y.172 Hydrogen bonds: B:N.169, B:S.173

1 x ZN: ZINC ION(Non-covalent)

ZN.10: 3 residues within 4Å: Chain A: H.352, E.353, H.356 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.352, A:H.356

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ma, C.B. et al., Multiple independent acquisitions of ACE2 usage in MERS-related coronaviruses. Cell (2025)

Release Date

2025-02-12

Peptides

Angiotensin-converting enzyme: A
MOW15-22 RBD: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Angiotensin-converting enzyme

MOW15-22 RBD