SMTL ID : 8zyf.2 (1 other biounit)

Crystal structure of ZW2G10 Fab in complex with omicron RBD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG.1: 7 residues within 4Å: Chain A: F.4, D.5, F.8, N.9, V.33, L.34 Chain C: W.108 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.8, A:L.34 Hydrogen bonds: A:D.5, A:N.9, A:V.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, G. et al., Nasal delivery of secretory IgA confers enhanced neutralizing activity against Omicron variants compared to its IgG counterpart. Mol.Ther. (2025)

Release Date

2025-03-26

Peptides

Spike protein S1: A
ZW2G10 fab light chain: B
ZW2G10 fab heavy chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
E

Spike protein S1

ZW2G10 fab light chain

ZW2G10 fab heavy chain

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