SMTL ID : 9au8.1

Ternary complex of human DNA polymerase theta polymerase domain with a mismatched T:T base pair

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x TTP: THYMIDINE-5'-TRIPHOSPHATE(Non-covalent)

TTP.1: 17 residues within 4Å: Chain A: R.450, D.539, Y.540, Q.542, L.543, E.544, F.568, R.588, K.592, Q.593, Y.596, Y.600, D.749 Chain B: C.20 Chain C: T.9, G.10 Ligands: MG.2 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:K.592, A:Q.593, A:Y.596 Hydrogen bonds: A:R.450, A:D.539, A:Q.542, A:L.543, A:E.544, A:D.749, A:D.749 Salt bridges: A:R.588, A:K.592, A:K.592, A:K.592

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: D.539 Ligands: TTP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.539

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, C. et al., Structural Basis of Error-prone DNA Synthesis Conducted by DNA Polymerase Theta. To be published

Release Date

2025-03-05

Peptides

DNA polymerase theta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA polymerase theta

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