SMTL ID : 9axz.1

geranine G-induced 2N4R tau filaments

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-hexamer

Ligands

3 x 01: 4-hydroxy-3-{(E)-[4-(6-methyl-1,3-benzothiazol-2-yl)phenyl]diazenyl}naphthalene-2,7-disulfonic acid

01.1: 14 residues within 4Å: Chain A: Q.288, S.289, K.290 Chain B: Q.288, K.290, G.303, G.304 Chain C: Q.288, K.290, G.304 Chain D: Q.288, K.290 Chain E: Q.288, K.290 11 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A, 2 interactions with chain E, 2 interactions with chain C, 1 interactions with chain D Hydrophobic interactions: B:K.290, E:Q.288, E:K.290, C:K.290, D:K.290 Hydrogen bonds: B:G.303, B:G.304, A:Q.288, A:Q.288, C:Q.288 Salt bridges: A:K.290 01.2: 4 residues within 4Å: Chain B: H.299 Chain C: H.299 Chain D: H.299 Chain E: H.299 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain E Hydrogen bonds: D:H.299 Salt bridges: E:H.299 01.3: 9 residues within 4Å: Chain B: Q.307, V.309 Chain C: Q.307, V.309 Chain D: Q.307, V.309 Chain E: Q.307, V.309 Chain F: Q.307 8 PLIP interactions: 3 interactions with chain D, 1 interactions with chain C, 2 interactions with chain E, 2 interactions with chain B Hydrophobic interactions: D:Q.307, D:V.309, C:Q.307, E:Q.307, E:V.309, B:Q.307, B:V.309 Hydrogen bonds: D:Q.307

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malyshka, D. et al., Submission name: Cryo-EM visualization of tau aggregation inducer-interaction sites reveals triggers of tau fibrillation and drivers of small-molecule binding. To Be Published

Release Date

2025-09-10

Peptides

Isoform Tau-F of Microtubule-associated protein tau: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Isoform Tau-F of Microtubule-associated protein tau

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