SMTL ID : 9ay9.3 (3 other biounits)

Co-crystal structure of human PRMT9 in complex with MRK-990 inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

monomer

Ligands

1 x 01: 7-[5-S-(4-{[(2-tert-butylpyridin-3-yl)methyl]amino}butyl)-5-thio-beta-D-ribofuranosyl]-5-methyl-7H-pyrrolo[2,3-d]pyrimidin-4-amine

01.1: 20 residues within 4Å: Chain A: W.27, M.31, I.59, G.60, C.81, E.82, L.83, S.84, T.109, K.110, S.111, T.131, V.132, D.133, A.134, E.139, S.144, C.306, W.307, E.308 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:W.27, A:L.83, A:T.131, A:E.308 Hydrogen bonds: A:L.83, A:S.84, A:S.111, A:S.111, A:S.144, A:E.308 pi-Stacking: A:W.307

1 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 4 residues within 4Å: Chain A: S.580, Q.581, T.582, P.621 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zeng, H. et al., Co-crystal structure of human PRMT9 in complex with MRK-990 inhibitor. To be published

Release Date

2024-12-04

Peptides

Protein arginine N-methyltransferase 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Protein arginine N-methyltransferase 9

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