SMTL ID : 9ayq.2 (1 other biounit)

SMARCA2 in complex with a pyridine-2-one-based inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 18 residues within 4Å: Chain A: T.113, L.114, K.115, Q.118, G.142, L.143, G.144, K.145, T.146, I.147, E.181, K.184, W.185, P.349, K.351, V.352, E.353, Y.354 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:T.113, A:K.115, A:K.115, A:Q.118, A:G.142, A:L.143, A:G.144, A:G.144, A:K.145, A:T.146, A:I.147, A:E.181, A:E.353, A:E.353, A:Y.354 Salt bridges: A:K.145 pi-Stacking: A:W.185

1 x 01: 4-cyano-N-[1-(2,2-difluoroethyl)-5-fluoro-6-oxo-1,6-dihydropyridin-3-yl]-5-(trifluoromethyl)thiophene-2-carboxamide

01.2: 20 residues within 4Å: Chain A: I.136, V.240, E.242, M.246, H.250, L.253, T.254, L.257, L.268, T.270, T.272, P.273, L.274, Q.275, E.280, L.281, A.283, L.284, F.287, L.336 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.268, A:L.284 Hydrogen bonds: A:E.242, A:Q.275, A:Q.275 Halogen bonds: A:H.250

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alford, J. et al., Discovery of a SMARCA2/4 ATPase Inhibitors Suitable for Use in SMARCA4-mutant Preclinical Models. To Be Published

Release Date

2025-04-09

Peptides

Probable global transcription activator SNF2L2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Probable global transcription activator SNF2L2

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