SMTL ID : 9azk.5 (5 other biounits)

Macrocyclic inhibitors targeting the prime site of the fibrinolytic serine protease plasmin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x 01: (1r,4S)-4-(aminomethyl)-N-[(24S)-5-methyl-8,11,16,23-tetraoxo-7,10,15,22-tetraazatetracyclo[24.2.2.2~18,21~.1~2,6~]tritriaconta-1(28),2(33),3,5,18,20,26,29,31-nonaen-24-yl]cyclohexane-1-carboxamide

01.1: 22 residues within 4Å: Chain A: T.40, M.44, F.46, C.47, H.62, C.63, E.65, K.66, D.194, S.195, C.196, Q.197, G.198, D.199, S.200, T.218, S.219, W.220, G.221, G.223, C.224, Y.233 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:T.40, A:F.46, A:F.46, A:F.46, A:K.66, A:Q.197, A:Q.197, A:S.200, A:T.218 Hydrogen bonds: A:S.195, A:S.195, A:G.198, A:D.199, A:S.200 Water bridges: A:K.66, A:V.232 pi-Cation interactions: A:K.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guojie, W., Macrocyclic inhibitors targeting the prime site of the fibrinolytic serine protease plasmin. To Be Published

Release Date

2024-10-30

Peptides

Plasminogen: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

Plasminogen

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