SMTL ID : 9azu.1

Crystal structure of PDC-3 beta-lactamase in complex with taniborbactam

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.73 Å

Oligo State

monomer

Ligands

1 x KJK: (3~{R})-3-[2-[4-(2-azanylethylamino)cyclohexyl]ethanoylamino]-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid

KJK.1: 13 residues within 4Å: Chain A: G.89, S.90, Q.146, Y.177, N.179, V.239, Y.249, K.342, T.343, G.344, S.345, N.347, N.373 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.177, A:V.239 Hydrogen bonds: A:S.90, A:Q.146, A:N.179, A:T.343, A:S.345, A:S.345, A:S.345, A:S.345, A:N.373, A:R.376 Water bridges: A:P.241, A:P.241, A:K.342, A:K.342 Salt bridges: A:K.342

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mack, A.R. et al., Mechanisms of Antibiotic Resistance and Inhibition of PDC-88, a Cefepime-Hydrolyzing R2-loop Deletion Variant of Pseudomonas-derived Cephalosporinase. To Be Published

Release Date

2025-03-19

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase

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