SMTL ID : 9b1p.1 (1 other biounit)

Mycolicibacterium smegmatis ClpS with TrpSer dipeptide and Mg2+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: D.79, R.80 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.79, H2O.1, H2O.2 MG.2: 7 residues within 4Å: Chain A: V.11, W.12, D.14, N.17, L.72, W.73 Chain B: W.1 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:W.12, A:D.14

1 x NI: NICKEL (II) ION(Non-covalent)

NI.3: 2 residues within 4Å: Chain A: H.45 Chain B: W.1 4 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: B:W.1, A:H.45, H2O.1, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Presloid, C.J. et al., ClpS Directs Degradation of N-Degron Substrates With Primary Destabilizing Residues in Mycolicibacterium smegmatis. Mol.Microbiol. (2025)

Release Date

2024-12-11

Peptides

ATP-dependent Clp protease adapter protein ClpS: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
F

ATP-dependent Clp protease adapter protein ClpS

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