SMTL ID : 9b6u.1

Envelope protein ASU of YFV-17D in complex with 2C9 Fab

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-3-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: N.151, T.154, D.361 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:T.154 Hydrogen bonds: A:D.361 NAG.2: 1 residues within 4Å: Chain B: N.151 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.151 NAG.3: 2 residues within 4Å: Chain C: A.147, N.151 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:A.147 Hydrogen bonds: C:N.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bibby, S. et al., A single residue in the yellow fever virus envelope protein modulates virion architecture and vaccine potency. To Be Published

Release Date

2025-09-03

Peptides

Envelope protein E: ABC
2C9 Fab heavy chain: DFH
2C9 Fab light chain: EGI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

F
F

H
H

E
E

G
G

I
I

Envelope protein E

2C9 Fab heavy chain

2C9 Fab light chain

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