SMTL ID : 9b76.1

Crystal structure of humanized 44H10 Fab Version 21

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.73 Å

Oligo State

hetero-1-1-mer

Ligands

10 x K: POTASSIUM ION(Non-covalent)

K.1: 3 residues within 4Å: Chain A: L.29, T.73, S.76 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:T.73, H2O.2 K.2: 4 residues within 4Å: Chain A: S.7, G.8, V.10, T.114 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:G.8, A:T.114 K.4: 2 residues within 4Å: Chain B: S.114, N.137 No protein-ligand interaction detected (PLIP) K.5: 1 residues within 4Å: Chain B: Q.160 No protein-ligand interaction detected (PLIP) K.6: 1 residues within 4Å: Chain B: V.110 No protein-ligand interaction detected (PLIP) K.7: 1 residues within 4Å: Chain B: Q.199 No protein-ligand interaction detected (PLIP) K.8: 2 residues within 4Å: Chain B: F.116, I.117 No protein-ligand interaction detected (PLIP) K.9: 1 residues within 4Å: Chain B: V.115 No protein-ligand interaction detected (PLIP) K.10: 1 residues within 4Å: Chain B: N.93 No protein-ligand interaction detected (PLIP) K.11: 5 residues within 4Å: Chain B: E.28, I.29, S.30, G.68, T.69 No protein-ligand interaction detected (PLIP)

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 4 residues within 4Å: Chain B: S.14, K.107, R.108, T.109 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:T.109 Hydrogen bonds: B:S.14, B:K.107 Salt bridges: B:K.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kassardjian, A. et al., Humanization of Pan-HLA-DR mAb 44H10 Hinges on Critical Residues in the Antibody Framework. Antibodies (2024)

Release Date

2024-08-07

Peptides

h44H10-V21 Antibody, heavy chain: A
h44H10-V21 Antibody, light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

h44H10-V21 Antibody, heavy chain

h44H10-V21 Antibody, light chain

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