SMTL ID : 9b7a.1

Crystal structure of peroxiredoxin 1 with RA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

homo-dimer

Ligands

1 x ROA: (2R)-3-(3,4-dihydroxyphenyl)-2-{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}propanoic acid(Non-covalent)

ROA.1: 13 residues within 4Å: Chain A: P.45, L.46, T.49, F.50, V.51, S.52, E.123, I.125, R.128, L.147, P.148 Chain B: T.166, H.169 17 PLIP interactions: 15 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:P.45, A:F.50, A:F.50, A:V.51, A:I.125, A:L.147, A:P.148, B:T.166 Hydrogen bonds: A:L.46, A:T.49, A:F.50, A:V.51, A:S.52, B:T.166 Water bridges: A:E.123, A:E.123 Salt bridges: A:R.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yin, W. et al., Inhibited peroxidase activity of peroxiredoxin 1 by palmitic acid exacerbates nonalcoholic steatohepatitis in male mice. Nat Commun (2025)

Release Date

2025-01-22

Peptides

Peroxiredoxin-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxiredoxin-1

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