SMTL ID : 9ba4.1

Full-length cross-linked Contactin 2 (CNTN2)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

6 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: M.52, N.53, A.83, G.84 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 5 residues within 4Å: Chain A: N.438, T.443, V.444, T.445, P.446 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 2 residues within 4Å: Chain A: F.466, N.475 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 3 residues within 4Å: Chain B: N.53, A.83, R.105 No protein-ligand interaction detected (PLIP) NAG-NAG.5: 4 residues within 4Å: Chain B: N.438, T.443, V.444, P.446 No protein-ligand interaction detected (PLIP) NAG-NAG.6: 2 residues within 4Å: Chain B: F.466, N.475 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.7: 4 residues within 4Å: Chain A: R.159, N.175, S.177, D.178 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.159, A:S.177 NAG.8: 2 residues within 4Å: Chain A: G.500, N.502 No protein-ligand interaction detected (PLIP) NAG.9: 3 residues within 4Å: Chain B: R.159, N.175, S.177 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.159, B:S.177 NAG.10: 2 residues within 4Å: Chain B: G.500, N.502 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fan, S. et al., Molecular mechanism of contactin 2 homophilic interaction. Structure (2024)

Release Date

2024-07-17

Peptides

Contactin-2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Contactin-2