SMTL ID : 9bes.1

Structure of S1_8A, a lambda-carrageenan specific sulfatase, in complex with monosaccharide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.08 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GAL: beta-D-galactopyranose(Non-covalent)

GAL.1: 11 residues within 4Å: Chain A: C.81, H.102, S.160, G.161, G.162, Y.164, H.201, K.279, D.353, Y.385, F.479 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:H.102, A:G.162, A:Y.164, A:Y.164, A:H.201, A:K.279, A:K.279 Water bridges: A:Y.159, A:D.353, A:D.353 Salt bridges: A:H.201, A:K.279

2 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: E.42, D.43, C.81, D.270, H.271 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.42, A:D.43, A:C.81, A:D.270, A:H.271 CA.3: 5 residues within 4Å: Chain B: E.42, D.43, X.81, D.270, H.271 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:E.42, B:D.43, B:D.270, B:H.271

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 6 residues within 4Å: Chain B: S.104, H.105, L.106, D.107, D.108, W.475 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:H.105, B:L.106, B:D.107, B:D.107, B:W.475

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hettle, J.A. et al., Structure of S1_8A, a lambda-carrageenan specific sulfatase, in complex with monosaccharide. To Be Published

Release Date

2025-08-27

Peptides

S1_8A Sulfatase: A
S1_8A Sulfatase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

S1_8A Sulfatase

S1_8A Sulfatase

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