SMTL ID : 9bgg.1

Structure of a hyperactive S1S3 truncation of the human GlcNAc-1-phosphotransferase

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: N.299, S.301, Q.302, D.305 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.301, A:Q.302, A:Q.302, A:D.305 NAG.2: 3 residues within 4Å: Chain A: N.419, S.421, H.422 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.421 NAG.3: 3 residues within 4Å: Chain B: N.299, S.301, Q.302 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.299, B:S.301 NAG.4: 3 residues within 4Å: Chain B: N.419, S.421, H.422 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.419

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, H. et al., Structure of a truncated human GlcNAc-1-phosphotransferase variant reveals the basis for its hyperactivity. J.Biol.Chem. (2024)

Release Date

2025-02-26

Peptides

highly active truncation of GlcNAc-1-phosphotransferase, S1S3,N-acetylglucosamine-1-phosphotransferase subunit beta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

highly active truncation of GlcNAc-1-phosphotransferase, S1S3,N-acetylglucosamine-1-phosphotransferase subunit beta