SMTL ID : 9bh4.1

PRMT1 hexamer, Protein Arginine Methyl transferase

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-hexamer

Ligands

6 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 20 residues within 4Å: Chain A: Y.16, H.22, M.25, R.31, G.55, S.56, G.57, I.60, L.61, I.76, E.77, C.78, S.79, G.103, K.104, V.105, E.106, E.121, M.132, T.135 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:H.22, A:G.55, A:C.78, A:S.79, A:V.105, A:E.106 Salt bridges: A:R.31 SAH.2: 20 residues within 4Å: Chain B: Y.16, H.22, M.25, R.31, G.55, S.56, G.57, I.60, L.61, I.76, E.77, C.78, S.79, G.103, K.104, V.105, E.106, E.121, M.132, T.135 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:H.22, B:G.55, B:C.78, B:S.79, B:V.105, B:E.106, B:T.135 Salt bridges: B:R.31 SAH.3: 20 residues within 4Å: Chain C: Y.16, H.22, M.25, R.31, G.55, S.56, G.57, I.60, L.61, I.76, E.77, C.78, S.79, G.103, K.104, V.105, E.106, E.121, M.132, T.135 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:H.22, C:G.55, C:C.78, C:S.79, C:V.105, C:E.106, C:T.135 Salt bridges: C:R.31 SAH.4: 20 residues within 4Å: Chain D: Y.16, H.22, M.25, R.31, G.55, S.56, G.57, I.60, L.61, I.76, E.77, C.78, S.79, G.103, K.104, V.105, E.106, E.121, M.132, T.135 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:H.22, D:G.55, D:C.78, D:S.79, D:V.105, D:E.106, D:T.135 Salt bridges: D:R.31 SAH.5: 20 residues within 4Å: Chain E: Y.16, H.22, M.25, R.31, G.55, S.56, G.57, I.60, L.61, I.76, E.77, C.78, S.79, G.103, K.104, V.105, E.106, E.121, M.132, T.135 8 PLIP interactions: 8 interactions with chain E Hydrogen bonds: E:H.22, E:G.55, E:C.78, E:S.79, E:V.105, E:E.106, E:T.135 Salt bridges: E:R.31 SAH.6: 20 residues within 4Å: Chain F: Y.16, H.22, M.25, R.31, G.55, S.56, G.57, I.60, L.61, I.76, E.77, C.78, S.79, G.103, K.104, V.105, E.106, E.121, M.132, T.135 7 PLIP interactions: 7 interactions with chain F Hydrogen bonds: F:H.22, F:G.55, F:C.78, F:S.79, F:V.105, F:E.106 Salt bridges: F:R.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nadendla, E.K. et al., PRMT1 hexamer, Protein Arginine Methyl transferase. To Be Published

Release Date

2025-04-30

Peptides

Protein arginine N-methyltransferase 1: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Protein arginine N-methyltransferase 1

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