SMTL ID : 9bit.1

Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cloxacillin, pose 1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x CXN: CLOXACILLIN(Non-covalent)

CXN.1: 18 residues within 4Å: Chain A: E.53, R.57, Y.60, Y.61, K.64, Y.94, K.161, P.162, A.165, F.187, Y.188, I.191, W.313, S.626, L.630, W.649, L.650, V.653 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.61, A:Y.94, A:K.161, A:F.187, A:I.191, A:W.313, A:L.650 Hydrogen bonds: A:Y.94, A:K.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parker, J.L. et al., Structural basis for antibiotic transport and inhibition in PepT2. Nat Commun (2024)

Release Date

2024-07-24

Peptides

Solute carrier family 15 member 2: A
nanobody: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Solute carrier family 15 member 2

nanobody

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