SMTL ID : 9bjc.1

Crystal structure of CDK2/Cyclin E1 in complex with XC208

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 01: (5aS,6S,7S)-3,7-dihydroxy-6-methoxy-1,4,6,9-tetramethyl-6,7-dihydrodibenzo[b,f][1,4]oxazepine-8,11(5aH,10H)-dione

01.1: 13 residues within 4Å: Chain A: I.11, V.19, A.32, K.34, F.81, E.82, F.83, L.84, H.85, Q.86, D.87, Q.132, L.135 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.32, A:F.81, A:F.81, A:L.135 Hydrogen bonds: A:L.84, A:L.84, A:D.87, A:D.87, A:Q.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Verdine, G.L., Nature-guided discovery of a tunable kinase inhibitor scaffold. To Be Published

Release Date

2025-08-27

Peptides

Cyclin-dependent kinase 2: A
G1/S-specific cyclin-E1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cyclin-dependent kinase 2

G1/S-specific cyclin-E1

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