SMTL ID : 9bkv.1

DosP R97A bent form

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 17 residues within 4Å: Chain A: I.36, I.65, L.68, I.69, P.70, L.73, I.81, N.84, K.89, V.92, E.93, G.94, M.95, L.99, Q.100, L.115, Y.126 15 PLIP interactions: 15 interactions with chain A, Hydrophobic interactions: A:I.36, A:I.65, A:I.65, A:I.69, A:I.81, A:I.81, A:L.99, A:L.115, A:Y.126 Hydrogen bonds: A:N.84, A:E.93, A:G.94, A:M.95 Salt bridges: A:K.89 pi-Cation interactions: A:H.77 HEM.2: 19 residues within 4Å: Chain B: I.36, W.53, L.68, I.69, P.70, L.73, H.77, I.81, N.84, K.89, V.92, G.94, M.95, L.99, L.101, F.113, L.115, Y.126, A.128 18 PLIP interactions: 18 interactions with chain B, Hydrophobic interactions: B:I.36, B:I.36, B:W.53, B:I.69, B:I.81, B:N.84, B:V.92, B:L.101, B:L.101, B:F.113, B:L.115, B:L.115, B:Y.126, B:A.128 Hydrogen bonds: B:G.94, B:M.95 Salt bridges: B:K.89 Metal complexes: B:H.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, W. et al., Structures of the multi-domain oxygen sensor DosP: remote control of a c-di-GMP phosphodiesterase by a regulatory PAS domain. Nat Commun (2024)

Release Date

2024-11-20

Peptides

Oxygen sensor protein DosP: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Oxygen sensor protein DosP

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