SMTL ID : 9brv.2 (1 other biounit)

SARS-CoV-2 Papain-like Protease (PLpro) with Fragment 5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.194, C.197, C.229, C.231 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.194, A:C.197, A:C.229, A:C.231

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: W.111, N.114, N.115, S.116, G.276, H.277 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.111, A:S.116 Salt bridges: A:H.277

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: K.131, F.132, Q.138 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Taylor, A.J. et al., Fragment-Based Screen of SARS-CoV-2 Papain-like Protease (PL pro ). Acs Med.Chem.Lett. (2024)

Release Date

2024-07-31

Peptides

Papain-like protease nsp3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Papain-like protease nsp3

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