SMTL ID : 9buk.1

Outward-facing, ATP-bound Multidrug Resistance-associated Protein 2 (MRP2) (E1462Q)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 18 residues within 4Å: Chain A: E.647, T.653, P.672, G.674, S.675, G.676, K.677, S.678, S.679, Q.706, H.820, G.1435, N.1436, S.1438, I.1439, G.1440, Q.1441 Ligands: MG.3 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:P.672, A:G.674, A:S.675, A:G.676, A:K.677, A:S.678, A:S.679, A:H.820, A:S.1438, A:I.1439, A:G.1440, A:Q.1441 Salt bridges: A:K.677, A:K.677 pi-Stacking: A:W.646, A:W.646 ATP.2: 20 residues within 4Å: Chain A: L.746, I.759, N.760, S.762, G.763, G.764, Q.765, Y.1309, V.1316, R.1335, T.1336, G.1337, A.1338, G.1339, K.1340, S.1341, S.1342, Q.1382, H.1493 Ligands: MG.4 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:S.762, A:G.763, A:G.764, A:Q.765, A:G.1337, A:A.1338, A:G.1339, A:G.1339, A:K.1340, A:S.1341, A:S.1342, A:Q.1382 Salt bridges: A:K.1340, A:K.1340, A:H.1493 pi-Stacking: A:Y.1309, A:Y.1309

2 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain A: S.678, Q.706, D.785 Ligands: ATP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:S.678 MG.4: 3 residues within 4Å: Chain A: S.1341, Q.1382 Ligands: ATP.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:S.1341

3 x UNL: UNKNOWN LIGAND

UNL.5: 1 residues within 4Å: Chain A: F.376 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.376 UNL.6: 8 residues within 4Å: Chain A: I.180, A.183, F.184, S.185, L.201, S.202, T.205, S.207 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.180, A:A.183, A:T.205 Hydrogen bonds: A:S.185, A:S.202 UNL.7: 3 residues within 4Å: Chain A: V.1135, Q.1138, M.1139 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.1135

5 x CLR: CHOLESTEROL(Non-covalent)

CLR.8: 8 residues within 4Å: Chain A: Y.967, I.979, F.1049, L.1099, W.1102, T.1259, I.1262, E.1263 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.967, A:I.979, A:F.1049, A:L.1099, A:W.1102, A:W.1102, A:T.1259, A:I.1262, A:I.1262 Hydrogen bonds: A:E.1263 CLR.9: 7 residues within 4Å: Chain A: F.145, Q.148, L.357, W.358, Y.361, I.365 Ligands: CLR.10 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.145, A:F.145, A:L.357, A:W.358, A:W.358, A:Y.361, A:Y.361, A:I.365, A:I.365 CLR.10: 4 residues within 4Å: Chain A: L.357, Y.361 Ligands: CLR.9, CLR.11 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:Y.361 CLR.11: 5 residues within 4Å: Chain A: F.147, R.152, L.155, Y.172 Ligands: CLR.10 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.147, A:R.152, A:L.155, A:Y.172 CLR.12: 2 residues within 4Å: Chain A: S.1136, V.1214 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.1214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koide, E. et al., Inward-facing, ATP-bound Multidrug Resistance-associated Protein 2 (MRP2) (E1462Q). To Be Published

Release Date

2024-12-18

Peptides

ATP-binding cassette sub-family C member 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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ATP-binding cassette sub-family C member 2

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