SMTL ID : 9bum.1

Structure of r-glutamyl carboxylase (GGCX)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: G.537, E.563, N.570, Y.590, T.591 No protein-ligand interaction detected (PLIP)

1 x CLR: CHOLESTEROL(Non-covalent)

CLR.2: 9 residues within 4Å: Chain A: L.144, W.147, L.151, Y.162, L.166, F.169, E.373, Q.374, L.377 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.144, A:W.147, A:W.147, A:L.151, A:L.166, A:F.169, A:F.169, A:L.377 Hydrogen bonds: A:Y.162, A:Q.374

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, R. et al., Structure and mechanism of vitamin-K-dependent gamma-glutamyl carboxylase. Nature (2025)

Release Date

2025-01-29

Peptides

Vitamin K-dependent gamma-carboxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Vitamin K-dependent gamma-carboxylase

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