SMTL ID : 9c12.1

Leukotriene C4-bound Multidrug Resistance-associated Protein 2 (MRP2)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x LTX: (5~{S},6~{R},7~{E},9~{E},11~{Z},14~{Z})-6-[(2~{R})-2-[[(4~{S})-4-azanyl-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]-3-( 2-hydroxy-2-oxoethylamino)-3-oxidanylidene-propyl]sulfanyl-5-oxidanyl-icosa-7,9,11,14-tetraenoic acid(Non-covalent)

LTX.1: 16 residues within 4Å: Chain A: K.329, L.378, F.382, F.437, Q.447, F.591, M.595, M.598, T.1104, C.1105, R.1205, E.1212, Q.1250, T.1251, W.1254, R.1257 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.378, A:T.1251, A:W.1254, A:W.1254 Hydrogen bonds: A:Q.447, A:E.1212, A:Q.1250 Salt bridges: A:K.329, A:R.1205, A:R.1257

5 x CLR: CHOLESTEROL(Non-covalent)

CLR.2: 3 residues within 4Å: Chain A: F.1049, L.1099, E.1263 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.1099 CLR.3: 8 residues within 4Å: Chain A: P.19, F.145, Q.148, W.358, Y.361, I.365 Ligands: CLR.4, CLR.6 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.145, A:Q.148, A:W.358, A:Y.361, A:Y.361, A:I.365 CLR.4: 5 residues within 4Å: Chain A: Y.361, I.365 Ligands: CLR.3, CLR.6, UNL.18 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.361, A:Y.361, A:I.365 CLR.6: 4 residues within 4Å: Chain A: Q.148, R.152 Ligands: CLR.3, CLR.4 No protein-ligand interaction detected (PLIP) CLR.8: 3 residues within 4Å: Chain A: D.17, L.345 Ligands: UNL.14 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:D.17, A:L.345

13 x UNL: UNKNOWN LIGAND(Non-functional Binders)

UNL.5: 7 residues within 4Å: Chain A: A.183, F.184, S.185, S.202, T.205, S.207, F.376 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.376 Hydrogen bonds: A:S.185, A:S.202 UNL.7: 8 residues within 4Å: Chain A: W.130, I.204, L.372, F.376, C.377, C.380 Ligands: UNL.12, UNL.13 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.372 UNL.9: 2 residues within 4Å: Chain A: I.151, L.154 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.151, A:L.154 UNL.10: 2 residues within 4Å: Chain A: F.184 Ligands: UNL.11 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.184 UNL.11: 2 residues within 4Å: Chain A: F.181 Ligands: UNL.10 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:F.181 UNL.12: 1 residues within 4Å: Ligands: UNL.7 No protein-ligand interaction detected (PLIP) UNL.13: 4 residues within 4Å: Chain A: K.324, L.328, V.331 Ligands: UNL.7 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.328, A:V.331 UNL.14: 3 residues within 4Å: Chain A: V.338, L.342 Ligands: CLR.8 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.338, A:L.342 UNL.15: 2 residues within 4Å: Chain A: L.1130, L.1252 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.1130, A:L.1252 UNL.16: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) UNL.17: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) UNL.18: 1 residues within 4Å: Ligands: CLR.4 No protein-ligand interaction detected (PLIP) UNL.19: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koide, E. et al., Structural basis for the transport and regulation mechanism of the Multidrug resistance-associated Protein2. To Be Published

Release Date

2024-12-18

Peptides

ATP-binding cassette sub-family C member 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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ATP-binding cassette sub-family C member 2

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